α-Hydrazino Acids Inhibit Pyridoxal Phosphate-Dependent Decarboxylases via “Catalytically Correct” Ketoenamine Tautomers: A Special Motif for Chemical Biology and Drug Discovery?
α-Hydrazino Acids Inhibit Pyridoxal Phosphate-Dependent Decarboxylases via “Catalytically Correct” Ketoenamine Tautomers: A Special Motif for Chemical Biology and Drug Discovery?
(2025)
Autori:
Baine, Jonathan M.; Duhoo, Yoan; Doukov, Tzanko; Desfosses, Ambroise; Bisello, Giovanni; Beio, Matthew L.; Bauer, Olivia; Perduca, Massimiliano; Bacia-Verloop, Maria; Bertoldi, Mariarita; Phillips, Robert S.; Gutsche, Irina; Berkowitz, David B.
Titolo:
α-Hydrazino Acids Inhibit Pyridoxal Phosphate-Dependent Decarboxylases via “Catalytically Correct” Ketoenamine Tautomers: A Special Motif for Chemical Biology and Drug Discovery?
We present evidence that supports a ‘correct
hydrazone tautomer/Dunathan alignment model’ for how α-
hydrazino analogues of α-amino acids inhibit PLP enzymes.
Described is the asymmetric synthesis of L- and D-α-hydrazino
acid L-lysine analogues and their inhibition of Hafnia alvei lysine
decarboxylase (LdcI) via kinetic analysis, stopped-flow spectrophotometry,
and cryo-EM. We describe a similar investigation of the
important anti-Parkinsonism drug, carbidopa, with its human DOPA
decarboxylase (hDdc) target. Evidence is consistent with these three
hydrazino analogues forming the catalytically relevant ketoenamine
PLP-hydrazone tautomer in their target active sites, with the α-
carboxylate groups, though insulated, aligning with the PLP-π-
system in a Dunathan-model-like orientation. High-resolution cryo-
EM structures of the H. alvei LdcI holoenzyme (pdb 9E0M-2.1Å) and LdcI-bound L- and D-hydrazones (pdb 9E0O-2.0 Å; pdb
9E0Q-2.3Å) and the first X-ray crystal structure of hDdc-bound carbidopa (pdb 9GNS-1.93Å) support this ‘correct tautomer’ model.
These insights are expected to guide future PLP enzyme inhibitor development.
Id prodotto:
145467
Handle IRIS:
11562/1161147
ultima modifica:
5 maggio 2025
Citazione bibliografica:
Baine, Jonathan M.; Duhoo, Yoan; Doukov, Tzanko; Desfosses, Ambroise; Bisello, Giovanni; Beio, Matthew L.; Bauer, Olivia; Perduca, Massimiliano; Bacia-Verloop, Maria; Bertoldi, Mariarita; Phillips, Robert S.; Gutsche, Irina; Berkowitz, David B.,
α-Hydrazino Acids Inhibit Pyridoxal Phosphate-Dependent Decarboxylases via “Catalytically Correct” Ketoenamine Tautomers: A Special Motif for Chemical Biology and Drug Discovery?«ACS CATALYSIS»
, vol. 15
, 2025
, pp. 8204-8218